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00:26 testing. Sorry about that Catherine. almighty, Nice thing. Testing.

00:44 ? Hello. Hello? Hello. goodness. Testing that better.

01:00 alright. There we go. Sorry that. I wasn't expecting that at

01:07 . Alright, so let's go ahead get started. Our everybody doing all

01:18 . A couple of uh emailed you couple of things to add on.

01:29 What's up with Chapter four today, is um chapter five is less that

01:39 flip class thing which will which will , but it's going to carry over

01:43 Tuesday for sure. So um so and the metabolism I realized that that's

01:52 a lot of people is a Uh wicket. One way to put it

01:58 um can be a problem, it's you can get overwhelmed looking just

02:04 the reactions and all this kind of . So you don't have to memorize

02:11 80 something reactions. That would be insane to have you do that.

02:16 it's more like an overview kind of . Okay, so if you see

02:22 The whole process or part, we're break it down like four parts,

02:26 stages. Okay. And if so you see these four parts, you

02:33 at, you can identify the four and okay, that's what this

02:36 Okay, that's kind of the level going for. So anyways, so

02:40 you're doing the flip, the flip classes are kind of doing it on

02:45 own right. In other words, are gonna look at the pre recorded

02:51 , there's a couple of those that this and then the lecture notes of

02:54 and then kind of whatever it is do in terms of mastering the

02:58 that's what you're going to try to . And then we came in here

03:03 next Tuesday. I have a bunch clear questions to kind of just frame

03:08 discussion around that. Okay, so by the end you'll not find it

03:16 difficult as it can be, you , when you first get exposed to

03:19 stuff metabolism can be like, so um so don't wig out as

03:25 you're looking through the book and you all these pathways and circles and arrows

03:30 you know, it's uh there's a to do it without being overwhelmed.

03:36 . But it is it's a critical to know, I think because it's

03:40 how it's how we all work, , metabolism, that's how we can

03:45 and think and do and whatever, , how we can live, you

03:49 , it's true metabolism. So you to learn to understand some of the

03:53 of it, I think it's a thing. So anyway, that's what

03:57 trying to do this. Starting thursday . Uh so again, the routine

04:03 . So over here on out, just, you know, every week

04:06 blackboard uh typically a mastering assignment due following monday. So I just,

04:12 know, the routine stuff. Oh a I was told I didn't

04:16 wasn't aware that there is a piercing that Pearson is the textbook that we

04:24 and the mastering comes from that. there's actually a new age campus,

04:29 Pearson Ambassador which I never heard of he emailed right and made me sure

04:35 tell you all if you did sign for the free two week trial that's

04:39 answer. So don't let that and once it ends you have of course

04:44 up for it but just be aware you might go oh my god I

04:49 access master anymore because you're if you up for one of those two trials

04:53 ended so just kind of I'm assuming gonna be coming up soon if not

04:57 so just be aware of that? Alright let's see, we're gonna

05:03 So any questions you have to be content? Okay that's fine. So

05:10 gonna start with a question kind of some stuff from uh last week covered

05:17 kind of recover these things last last . Just kind of start with mini

05:24 of this material, like a shot you're answering this, remember to

05:32 sorry about that. I want to that. Um There we go

05:36 Uh look look blackboard. So for points. Uh the stuff from last

05:45 since the start of the semester is up there. I'm gonna remove it

05:49 . Remember today it starts real? but I have kept up the previous

05:54 so do your senior points then you're . Okay uh if you're not saying

06:00 and you use your clipper and I help that but go to um take

06:07 support all the information in the any issues with registration and what have

06:12 So consult that they're over in um have libraries. You behind the

06:18 Okay. It'll go down stairs. that's that's where they're at. Um

06:25 , let's set the timer on Just not that way. There we

06:32 . Okay, so um see so I can't remember these things are

06:44 so if you use a clicker, there's like 40 questions in one session

06:49 use a clicker, it cancels one but that's kind of attendance point.

06:57 then uh Any questions you answer right wrong? two points. Okay.

07:05 the threshold to get that first one is to answer at least half the

07:10 . Okay. So anyway, that's . So let's go um with this

07:21 and so we get Okay. So , if you answered slime layer,

07:32 are correct. Okay. So we about the overview of the cell

07:37 Remember your focus is on goes into cells. So I only I show

07:46 only in terms for comparative purposes. ? So I'm not gonna test you

07:50 , you carry out cell testing on cell. Right? So we went

07:55 that um mm overview. So and go into more details today on different

08:04 of the cell uh we started last with the capsule slimer. So it's

08:09 of we're going outside in is our here. Right. So we started

08:13 what's on the very outside the capsule layer biofilm. Uh, then

08:20 okay. So, uh, that's growing spectrum of various factors. Talk

08:26 that a lot this semester has any that enable the sell it to cause

08:31 . Okay. Um, now there's things that aren't going to be a

08:36 even though it's a part of the . Right? So if I said

08:41 um, chromosome, is that a factor? Yes. No,

08:51 You have to follow the course if just say yes or no?

08:58 Yeah, that's been come. I say every cell has a chromosome.

09:09 never told how the chromosome. Sure that. Do we still have at

09:12 one chromosome? Yes. Let me . So it doesn't have a chromosome

09:19 the red blood cell. That's not a self cell. Okay, so

09:24 cells have chromosomes are all cells. . No. Right. So of

09:30 we're gonna core features of any everything . They're gonna come right. Those

09:34 the religious factors. Religious factors are or what if they were lacking?

09:37 they wouldn't cause disease? Yeah, didn't have a chromosome. It wouldn't

09:40 disease, but of course you'd be . Okay. But it's more specific

09:45 of features that enable it to cause . Making a toxin. It's allowing

09:49 sell to stick to the people of or whatever. We'll go into those

09:55 . But uh there's certain things that just basic parts of any cell or

09:59 don't consider this factor. Okay. actually filament role involved the movement.

10:07 bacteria have applied for the most part there. They have one chromosome.

10:12 not deployed like us. Okay. of course the slam there is is

10:18 the answer is not a it's a assemblage of just price accurate material

10:26 basically byproducts of metabolism times who's out of hangs around kind of random.

10:32 always there sometimes is sometimes isn't. that's a contrast to a capsule capsule

10:38 very structured uh entity surround the surrounding cell gene encoding. Okay, so

10:47 brings us in. So we're gonna first here on cell walls and kind

10:52 variations of that. Okay, so pro Kariya, so you have your

10:59 and your archaea. Okay. And those roots will have a number of

11:06 that will have a cell wall. , the cell wall, your familiarity

11:11 likely with the plant cell wall Right? It's not that completely different

11:16 . Um the uh among archaea there both groups, there are types of

11:24 positive gram. Okay. Um and we're gonna look at that first.

11:32 negative gram positive. Then there's pro types that don't follow that pattern that

11:38 variations and that's what's meant by a cell wall is a better term.

11:42 probably a typical cell envelopes is a term. Okay um remember that term

11:50 fact, walk this out and put because remember that for that reason that

11:59 refers to here is our cell, ? Cytoplasmic membrane. Well what's out

12:07 ? Okay, what's in this I'm exaggerating for a factor. But

12:11 out here? Right. It could the it could be a wall,

12:17 could be an outer membrane, like gram negative. It could be different

12:21 . That's what we'll be exploring So another question. So this is

12:27 I call. He's gonna be one and after. We're gonna look at

12:30 , gonna answer the scan results and I'm not gonna spend any time on

12:36 . And we're gonna see it again the road here today. And based

12:41 having gone through all this information, see if you change your answer the

12:45 time around. So take a look this now. We visited in about

12:52 minutes, seeming pause that and it's if you wanna ask your neighbor or

13:23 with somebody around you multiple people around . two heads are better than one

13:39 . Okay, let me put the on. Okay, 10 seconds and

14:10 we go. No. Alright we okay, I'm gonna take a picture

14:17 that and see if anything changes. Okay so gram negative gram positive.

14:29 bacterial cell wall uh those that have bacteria. Uh the majority have cell

14:37 don't. Okay um the grand stain um As old as it is,

14:47 the early 1900s to turn of the . I think it was the turn

14:52 the 20th century. It was developed used and is still used today.

14:57 still has utility uh diagnostically it can useful still. Okay, the cell

15:07 itself. Um the rice protection. we talked about this a little bit

15:15 returns hyper tonic hype atomic. Remember that that relates to move water.

15:21 bacterial cells tend to keep themselves slightly tonic which means water moves in.

15:29 ? That causes the seldom expand because has a cell wall that water that

15:37 can press against the wall. You of have to maintain the integrity of

15:41 cell the shape of the cell. it kind of works together.

15:45 Of course. Can provide protection as . Uh clinical importance of it.

15:51 is it depends on the location of patient sample. The morphology of the

16:00 is a gram negative and positive. for example a uh a sample of

16:07 cerebral spinal fluid which is um it's fluid that bathes your brain and spinal

16:14 um if you take a sample of patient who is sick, is experiencing

16:22 of a stiff neck fever likely. and you take that and you do

16:27 stain look under the microscope and you these deployed diplo caucuses coxon pairs.

16:36 , gram negative. That's pretty much meningitis. Okay. Step throat.

16:44 folks swab gram stain some in So it does have significance still today

16:52 terms of diagnosis, it's it's it's first when you're trying to identify a

16:59 or are you grant staying is often first thing you do because it can

17:05 them into uh into two groups, ? Or in a group that doesn't

17:10 with the grandstand. So you can can form the basis for identification and

17:15 , it's still used for that Okay, so here's some examples

17:21 pneumonia as well, strep throat. again, all these differentiate by the

17:27 the where the samples coming from. , as well. You can throw

17:31 there others like gonorrhea as well. and some other some other infectious

17:39 So and also, you know, gram stain is sheep. So depending

17:43 the lab urine and and whistles in of machinery to do things for

17:50 Gram stain is pretty basic. So can, you know from that reason

17:54 can be quite useful. So so the nature of the of the

18:00 . So chemically you're not gonna remember structures but it's going to be good

18:06 the names. Okay, so that's repeating units. So often called nag

18:16 nag for short. So making those and saying, okay, um that's

18:23 base structure, right? And it's a strand that wrapped around itself.

18:29 . A gram negative has a very amount of that compared to gram

18:34 And maybe go around once, one or maybe twice at most.

18:39 grand positive will be much more than . Okay, significantly more. And

18:45 the structure again. So we see here are the uh means carbohydrates,

18:57 . Okay, that's the protein There's like 22 parts to the

19:03 Okay sure. Part of the uh . If you will, that's the

19:09 polymers. And then in between there linkages called cross bridging. Okay,

19:15 the peptide sequence. Right? So like five meal acids long that link

19:21 and they link up at the in Seattle you're Amick acid. So are

19:28 are in proximity? That's what the occur. Okay. And so that

19:34 that cross bridging is critical. If you don't have the cross bridging

19:40 you just have the strands. Remember ? I don't think it is as

19:45 like a brick wall and an inflexible . Not dyslexic. Okay. And

19:50 if you remove the cross bridges then parallel strands can move apart. Just

19:57 you have the membrane underneath, Okay, so that those cross

20:03 the membrane underneath will bubble through. . And it can actually break and

20:10 lights and that's that will heal So those cross bridges are critical to

20:15 maintain structure thing. Okay, so like penicillin. So there's a number

20:21 different components enzymes that work to make cross bridges. Okay. And so

20:31 so those are targets for lots of antibiotics, basically. Anything that ends

20:37 C. I. Bless you. . I. L. L.

20:43 . N. M. penicillin, , penicillin and others. They all

20:49 some aspect of cell wall synthesis. . And so again, if you

20:56 the so well the membrane begins to out and license. Right? Probably

21:01 cell. So here is another way around the cells which will be a

21:10 shaped cell. I'm sorry, rod cells would fit into this Kocsis similarly

21:15 a have a the same kind of around stuff wrapped around the cell and

21:20 Grand positive. It does this several . Okay. Um so looking at

21:26 by side you can really see the . Uh you know, the gram

21:31 is simple compared to the Grand There's more stuff with the Native.

21:38 , the grand positives basically this The thick peptidoglycan. Okay. And

21:46 these look like strings. They span whole width of the so all the

21:54 through connecting it to the member. is what we call acids.

22:02 sorry. And again, to So it's very thick. So this

22:07 to kind of reinforce the whole Kind of like uh anybody familiar with

22:11 ? You heard a rebar so you rebar and concrete to reinforce concrete.

22:15 principle here. Right uh negative you So note that they refer to the

22:25 membrane. It's equivalent same as the membrane over the grand posit. But

22:31 use inner because there happens to be one. Another layer out beyond their

22:36 that inner membrane but it is the membrane membrane. And okay in the

22:43 is where the cell wall materials. again see very 111 layer thick compared

22:51 several layers here. Okay, and this is two connected through um the

22:59 proteins. Okay, so specific specific each one g positive gasses, gram

23:07 . No, only lipoproteins. And you don't have these in the ground

23:13 . So you want to know what what does depend what? Okay,

23:19 it's a separate like can uh hear linkages with the little proteins are through

23:26 peptide cross bridges. Okay. Uh of course they're here as well between

23:31 strands. Okay, um now this memory. Right lifting little lipid policy

23:41 . Right shooters. So it's very with these very long chain sugars.

23:48 sugars together. Almost called the old talk about the second. So even

23:54 the outer membrane there's differences on either . So you see on this half

24:01 this structure this have here. so even within the membrane that both

24:07 are quite different. Okay, so have these long um polymers of sugars

24:13 connecting to uh the fat part of parts of the marker in here.

24:20 the membrane uh you do have proteins facilitate the entry of material.

24:27 Um the pepper, black hand itself positive or negative, the porosity,

24:34 ability of things to get through is fairly easy. It's not it's not

24:40 , things can pass through it. , of course it's more restrictive when

24:45 have to go through a membrane. that's why you have portions here.

24:48 then you have another layer here, have to get through. So molecules

24:51 a gram negative have to go through layers to get into the cell right

24:57 to get through here, which is that difficult and then gets restricted when

25:01 get to the memory. Okay, um the other thing, I think

25:07 just different views of the same So here's your grand positive here is

25:12 very thick type of light can cross and blue in fact. And the

25:20 psychotic acids. Right, so they some books do this, some don't

25:26 , it does uh differences gasses in of wall versus um gasses uh It

25:34 means what they're looking to. so these links throughout the black

25:40 the link that these link it to member. Okay. Um now and

25:48 again the structure is just an example like charged molecules. Um uh but

25:58 , for reinforcing that, so gram . Right? Again, much less

26:04 . Okay, two layers. And this uh material. And then

26:13 course because we have an outer membrane we've got we've got an additional

26:18 We have cytoplasm down here uh we called para. Right that's the layer

26:25 the inner and outer membrane. That's the cell wall resides in the grand

26:29 . Okay. And this environment itself be different in terms of what hit

26:37 to decide that there will be different of enzymes in here. Different types

26:42 transport molecules and sites and things that differ slightly from what's inside here.

26:50 Okay. Remember rain out of membrane para plastic space. Okay. Flag

26:59 the book proteins LPS again uh different of the structures. And then let's

27:09 to focus on this. Okay so movement of materials information gram negative.

27:21 on the outer membrane are are not selective. So you can have multiple

27:28 going through these things. It gets restrictive when we get down to the

27:32 memory and actually gets into the interior . That has had a tend to

27:38 more specificity, more restrictive. Okay the uh core party Sacha. Right

27:47 this lipid a material. Okay. Opie sack. Right so we're gonna

27:50 about also is talked previously about the antigen. Okay so remember that was

27:59 the flagellum. Okay So both of produced an immune response. Okay um

28:08 the location engine was developed for use something years ago. Um it's a

28:18 to identify. It produces a human . Okay so we've got and for

28:25 group of bacteria like E. coli um foodborne pathogens. Right. So

28:33 met you're aware of the 0157 Coli has caused a number of foodborne

28:40 in the past few years. That 1st to the engine. Right?

28:45 there's multiple numbers of different and they just differ in terms of the sugar

28:53 making up that cake you have that produce different. Okay so we've developed

29:05 particular antibodies to the different advantages and . Okay. So if there's an

29:13 of saying you want to know which it is. Well you just test

29:19 with the certain antibodies and allows you identify it rather quickly. Okay.

29:25 so that's really the sole purpose of . But the old engine, that's

29:30 that refers to. Okay. Used identification purposes, produces response.

29:36 Um now the lipid a material is I didn't want to put that

29:47 But people do this question. So question is it's not a question to

29:56 more or less. But the this here. Okay lipid a this material

30:06 that's released from the cell. So and licensed blows apart you know anything

30:15 part of the course now is released includes a liberal return. Okay,

30:20 no longer not part of the intact cells diet. Okay, so that's

30:25 we call endo toxic. Okay so gram negatives have that capability.

30:34 And that's what that is that liberated . Okay, harmless when the cells

30:42 , potentially harmful when the cell dies the material release. Okay, so

30:49 what happens is um there's a thing process will look at later called the

30:58 response. Okay, normal response. your response to a potential infection and

31:04 , Okay, and not letting it in your body. Uh So it's

31:09 local reaction. Okay. Um you a ruling occurs in your arm or

31:16 or something. Right? You get plants and it swells and hurts you

31:19 that kind of stuff. Right? an exciting tour responsibly. So uh

31:26 meant to contain any kind of bacteria get into your system at that

31:32 And take care. Okay. Now senator response. Part of the gators

31:38 released lots of different chemicals different of immune system cells or what to do

31:45 response. Okay. But things that the the infectious agent is to bring

31:52 cells, the side effects uh start all kinds of stuff. Right?

31:59 so that's fine. It happens in local. Okay. If in terms

32:05 body wide response. Okay, We're almost all of the pieces themselves can

32:12 to it. That's too much for body body. Can't handle it because

32:17 you have all the immune system cells your body releasing chemicals that we're having

32:22 body wide response. And you're not to handle it. Okay, That's

32:28 you can go into shock and you die. Okay, So it's all

32:33 of this endo toxic effect. again associated only with neighbors. So

32:41 this scenario here where the patient has sepsis infection caused by Klebsiella pneumonia,

32:48 ? Gram negative pathogen, respiratory pathogen experiences fever and nausea. Does anybody

32:54 what septicemia means? Accept a systemic ? Yes, correct. So it's

33:05 certainly into the blood, correct? to a local infection, septicemia is

33:11 gonna be traveling throughout your whole body the blood. Okay? So,

33:16 braddock is provided you stop the Okay, Over a few hours later

33:23 symptoms continue to worsen. So, bit of information, the vaccine does

33:30 , right? They tested on Klebsiella from the patient and proved that it

33:36 was fine. The antibiotic works. . But why why did the patient

33:40 worse? Exactly. That's really the prime action is doing his

33:48 But it's it's killing the cells and releasing that. So it's releasing a

33:55 . So, and it's doing And the main reason why is why

34:00 so dangerous, is this okay, because of this kind of affection.

34:05 if you catch it before it's gone , you're not gonna really face this

34:12 . So it's really about the seriousness the gram negative infection. And is

34:17 in the blood? And uh yeah, then that's that's that's much

34:23 serious. And so what then is is to give point mixing b prove

34:29 . So what happened, what do think the climates in obedient? So

34:35 have that circulating endo toxin, planets be actually combined it up, binding

34:41 up the endo toxin. So we're up. You don't have that effect

34:46 . Okay. So also an example of combining in a box,

34:55 So give them both at the same . Right? So, so you

34:59 himself in the mix and B. there to bind up the and you

35:05 in? And that's what you want do. If it's septicemia,

35:10 If it's traveling throughout the body, ? If you if you catch it

35:14 before it's still it's a local not the issue. But if it

35:19 this bad then yeah, you have really combine antibiotics like they did here

35:23 get the effect. So basically any negative, obviously it's only concern for

35:31 , but this is an issue. may need to be aware of uh

35:35 a patient with a handmade production if gets to the stage. So,

35:40 it's all about this end, a effect. Is there any questions about

35:45 ? Okay, so um gram negative ? So meningitis is gram negative um

35:55 to reorient as gram negative uh those of pneumonia is not grandpa. So

36:04 more beyond that, but you it can be an issue. Um

36:09 that's why you have to you have why it's important to diagnose in the

36:16 . What is it is a gram gram positive is it uh tested against

36:20 antibiotics? So that's that's why that is important. Um So you're in

36:27 cell walls. Okay um the mycoplasma don't continues. I'm glad it's not

36:38 at the same time. So you mycobacterium and then you have michael

36:45 Okay. two different completely different speeches lacks a cell wall altogether.

36:54 So they're very small there on the end of the spectrum in terms of

36:58 for bacterial bacterial types. Um Those respiratory pathogens. They actually get inside

37:05 own cells in your lungs and cause more you like symptoms. Um The

37:13 . So I would say roughly half archaea have a cell wall half don't

37:20 uh those that do, it's not to bacterial cell walls. Right?

37:27 it's made of what's called pseudo So this word here Mirian is like

37:35 I think it's kind of over name people like and it basically means pepper

37:40 like this is kind of a kind a version of that not identical to

37:45 bacteria have. Okay, in So micro bacteria. Alright so micro

37:52 um has unusual story on it does you look like an which you can

38:03 right here so that is present but doesn't properly stain with the grams

38:10 Okay it's um it's very thick and see how thick the rest of this

38:17 is all of this thickness compared to black. This is all very very

38:26 . Um You might call it acid long hydrocarbon molecules. They give it

38:33 a waxy consistency, very water right? Like clean together. So

38:41 liquid media this would be something like so you see uniform turbidity we call

38:48 cloudiness throughout. To hear the cells focused up here, concentrated at the

38:54 . You can stick together. Okay the plate on solid media have this

39:00 of weird appearance. If you put wire loop in there it's like you're

39:05 candle wax or something. All because this weird envelope and chemical structure.

39:12 . It also means kids um things a Slow time getting into their into

39:20 cell. Okay so where's the E may grow to this kind of density

39:27 12 hours. It takes about 48 for to see this amount of growth

39:35 mycobacterium. It has to do really its very thick combo. So it

39:39 it takes it was slow for nutrients to diffuse into their in itself.

39:46 gonna grow slower. Okay. And does. It also means that things

39:51 tuberculosis which is caused by the also that these are not easily treated.

39:59 , tuberculosis is actually being more chronic . It can last your lifetime.

40:05 certainly you know months and years of because antibiotics have a hard time getting

40:12 their. Okay so to approach different . Okay um uh inclusions. Okay

40:23 let me um I want to go for a second. I'm not gonna

40:28 you're taking lab you're gonna you're gonna exposed to this. But let me

40:32 look at the graham side by Let me go back to here quick

40:37 this picture. Okay so just to describe the nature of the gram positive

40:45 . Right? And in that state why one state one? Okay so

40:53 so the gram stain uses differentiates based color. Okay so you'll have crystal

41:03 is like a purplish color dye. you add that iodine iodine kind of

41:08 stick inside the cell. So you that to both. You apply it

41:12 your sample. Okay And a grand . Both both types will take it

41:19 . So both types after that first are both part and they're both.

41:25 no differentiation of both the same both . So it's the next step is

41:30 basically sets them apart, right? if you've got a gram negative and

41:35 next re agent is 95% ethanol. ethanol, ethanol, the chemical structure

41:47 it is such that it will dissolve . It dissolves the membrane.

41:53 so by having ethanol this, remember out here is very fatty, it's

41:59 lipid. Okay so ethanol begin to this. Make holes in it.

42:04 of course that allows sustain and and well sustained to escape right now you

42:11 have that here have very thick type leg down there. So disdain remains

42:17 those grand positives. Okay so after step of ethanol you have privilege grand

42:24 self you have colorless grand natives. so in order to visualize saffron is

42:35 standing with saffron to give it a color. So pink purple gram

42:44 So it's all all due to the of this outer membrane really that gram

42:49 lose this thing. So um but I said some like a mycobacterium with

43:00 thick envelope will not take the stain at all. So they develop you

43:05 to use they develop super concentrated and use heat to get the dye

43:11 So it's just a different process. that's what we call acid fasting.

43:17 um now here's Okay so we'll revisit question okay that we just went through

43:27 let's see and it changes that Alright, so after this we get

44:27 the next part which is um now going to get into the cell

44:35 You know my brain and what's that's up of that? What's inside?

44:47 . Right. Oh yeah, definitely to 20 I think we're like 1

44:59 before so exact that way up. is the right answer. So gram

45:04 . Um I haven't I remember of Michael back here we just saw has

45:09 I can tackle gas is found only gram positives. Opie psycho gram

45:16 And that's a gram negative cell. um All right so uh any questions

45:26 any of these? Okay so let's to membranes and transport. So here's

45:33 next question. Okay. Um The structure. What component provides the selective

45:43 characteristics of a membrane? So it's very specific structure. Um The selective

45:55 is an aspect due to one of . Okay. Mhm. Okay.

46:49 so it is the possible lipids. so the fossil lipids created by later

47:00 solution formed by layer structure which depicted um these fossil lipids. Right so

47:11 is the polar or water loving Right? Hydrophobic interior. Okay and

47:18 that was spontaneously formed by layers. on. Um There are what it's

47:32 the thing that lots of stuff is from getting in. Okay so if

47:40 are a small um non polar molecule or you can be something like Water

47:53 . 20. It's small enough. not charged although it's polar but it's

47:59 enough to get through. Okay. things like gasses, C. 02

48:07 . These can pass through freely. ? Um But many things can't

48:16 medial acids. Right? These are tells me they need help. They're

48:21 big. They're too polar bears often these can't get it right. The

48:26 core in here prevents it. So where proteins of various types come in

48:34 program. Okay. And so because the selected permeability of fossil lipids,

48:41 need these other proteins help help get in or out. Okay, so

48:49 and so we see here the structure . Of that by layer. And

48:58 movement of material occurs. Uh sometimes need the help of a protein.

49:06 . And so uh so we see here and uh the modules came through

49:16 marco polo can't get through the help proteins and the proteins in the

49:21 They give it the function out. . Uh membranes will barely depending on

49:27 the proteins in there are. The membrane is quite different from a plasma

49:34 . Right? There's gonna be enzymes things in mitochondria membranes that won't be

49:39 elsewhere. Right, so that's a class memory. Right. Full of

49:44 and things. So, memory is to be defined by the proteins and

49:47 molecules non foster lipid molecules that are there. Okay. Um so the

49:56 transport support functions support communication between cells connect connections between cells. All the

50:04 are involved in all these things and as well. So, um

50:10 so, of course. What about then? Okay, so take a

50:15 at this. Okay, basic transport . Okay. Movement or diffusion of

50:23 in and out of cell. And chemical principles, governments. Okay,

50:31 of diffusion. Right. Um but variations of transport type and the

50:42 Okay, so this is kind of this question is getting at a little

50:47 . Okay, so we've got a cell. Okay. And focus on

50:55 differences in Sony miles inside the Outside is maintaining that concentration inside the

51:05 despite what's going on outside. Alright, so that's kind of the

51:18 and so you know, microbes in environment are at the mercy of their

51:23 . So they're gonna wanna have an concentration of salutes inside and outside and

51:32 to maintain that can be harder for easier for others in terms of the

51:36 and what the how abundant they Okay, so many different types of

51:44 going on to maintain this. All right, so okay.

51:57 if you answered um transport You are . Okay, so we have 30

52:05 . Okay, they're they're being pumped . Yes. So uh so it's

52:13 that higher internal concentration despite it being low outside because the tendency will be

52:20 starting to flow out because remember it's about this. So, molecules will

52:28 move down their concentration great high to um Now to go the other way

52:40 it go in this direction low, inside then you better you have to

52:49 energy to bring it in, You're trying to stuff the molecules on

52:53 side stuff with them. Okay, gonna take energy to force more of

52:58 in there. Okay, going uphill or downhill downhill, ball, rolling

53:03 . I don't have to do Put energy. So the other thing

53:10 remember thinking, as we're getting closer metabolism. This is concept of energy

53:18 processes and energy required processes. And couple those things together. Energy releasing

53:26 requiring process and go, okay, we see that time and again in

53:33 in different forms, right? Were ready with A T. P.

53:38 ? Using a T. P. lies in it to make ADP and

53:44 . Right, That releases energy. how do you like a TPS and

53:50 that need energy then there's energy requiring . Even this is that that is

54:00 energy requiring process. Okay, to that. Okay. And the absolute

54:06 not hide realizing that making that. of course that's that's why you

54:13 Right? Whole cell respiration thing. using that energy from the food you

54:18 to make. So we'll save that thursday and next Tuesday. But that's

54:25 know, there's different ways to do to combine these types of energy energy

54:30 energy requirement. Okay. And concentration is one of those. Okay,

54:36 again, so, the answer here active transport. Any question about

54:42 Anybody dispute that? Okay, all right, so, just basic

54:49 . You're probably familiar with these So, uh passive diffusion. Um

54:57 pass. It doesn't require a passive . Uh the monetary diffuses down.

55:04 great. Okay, so the direction movement is all based on high,

55:10 , Is it going to flow out in well, what's what's the

55:13 Is a high inside and low outside vice versa. That's the way it

55:18 move. Okay, um as you here and so, simple diffusion processes

55:24 require any proteins. Okay, The are small enough to be non

55:30 uncharged. These get through without but those that do need help.

55:35 need some kind of protein. Either other, not a specific or more

55:41 . Right, depends. But you can't get there without help.

55:46 too big or and or charged what . Okay, so this is what

55:50 call facilitating. So but both of are passive processes as is as is

56:04 . Okay, now, I think thing about different okay, it's specific

56:12 movement of water, but the water moving to the high side inside.

56:19 ? It goes that way. So can hydrate those salads around. So

56:30 the highest saw you thought is, the way water goes. And water

56:36 , as you see here on this of diagram can move freely through simple

56:44 . Right? Well, can totally osmosis without any help. Okay,

56:50 there's times when it does use Aqua port, so water can move

56:58 and forth. But the cell maybe osmotic stress, which means might mean

57:05 water. Uh it's too much water in so it has to get rid

57:10 some stuff going out. So to movement of water faster, you can

57:14 aqua ports. Okay. And so can identify those and put them in

57:18 membranes rather quickly. If it needs get rid of water or take in

57:23 either way very quickly. Its life on it. You can do

57:28 But we can't move without the Just a little bit slower.

57:33 Uh And we'll talk just a little more about osmosis in a second.

57:38 The and so here the Saudi Michael's . And so we're not gonna do

57:46 quick question here. But which is cell isn't hype over time solution

57:55 Which one is in hip a So the ovals of cell obviously B

58:00 a hip atomic solution. Right? remember these terms are correlated. So

58:07 a hyper atomic solution then it must hyper tonic inside. Okay. And

58:14 uh this is B. The it's likely to swell up. Is which

58:26 ? Which one be? Right? , um hipaa tonic hyper tonic

58:34 All right. Let me write that inside a po okay, Outside.

58:53 they're always gonna be relative to each ones. Hyper tonic. The other

58:56 is the right. This isotonic. the same number of. Right?

59:04 And so water is gonna move to fi belies those Saudi markets go

59:13 Okay, so swell up as a . Okay, so um you

59:19 plant sailings uh This is the constant call pressure relates to osmotic pressure,

59:29 ? That's how plant plant wilts and over. It's because he has issues

59:34 osmosis, writes losing water. The cells can fix that to a

59:40 . They can produce more silence inside need to get rid of some kind

59:44 influence the flow of water. So bacterial cells they have to sell wall

59:50 what trying to keep themselves slightly hyper might be to what I can come

59:56 and then kinda help maintain shape that of thing. Um So again same

60:04 here. Okay so facilitating the uh people on both sides, hypo hypocrisy

60:16 the context of health care. You that's important in terms of ideas and

60:22 I. V. S that you patients that they're that they're the right

60:27 . So you blow up the patient's so cause the opposite the shrinkage of

60:34 . So um uh of course the function relates to osmosis obviously. Um

60:41 there any questions about hypersonic hypersonic? so again water goes towards the high

60:48 side, hyper tonic. Okay. Alright I can transfer we talked about

60:57 . All right so out of the into into the itself. Okay for

61:06 site is also remember son is all cytoplasm is basically everything that's inside that

61:17 . The side of saul is only water portion of that side. Okay

61:23 of course inside the cell as we are lots of water, lots of

61:30 , ions cards etcetera. Right? so structurally the nuclear Boyd. Okay

61:39 remember the nuclear coid is not a bound structure. It's simply the area

61:52 themselves. Okay. Remember that you're half Lloyd. The most part they

61:57 be and I'm not gonna go into now but they can be partial deployed

62:07 emphasis on partial. Okay. Which they may acquire a little bit of

62:14 . N. A. Like We'll talk about this in the next

62:17 . That may contain an additional gene that makes them partial to contain two

62:24 more copies of a certain gene or but not a complete we are complete

62:29 complete. Uh that's a promise but that's the exception. So again pathway

62:38 . Okay. For the most part size size range you see there um

62:45 size of bacteria is certainly not 10 less than what we've got. We've

62:51 much more obviously uh D. A. And so within the nuclear

62:57 itself. If we're looking at close different loops of uh unwound somewhere tightly

63:08 up. It's in areas where there unwound is when it's being expressed.

63:14 DNA gets expressed. These are expressed the protein. So in order to

63:18 that you have to access the we have to make it pulled apart

63:22 little bit make it exposed. So will see different areas that are like

63:27 . The protein finding good. Help it. There'll be a connection of

63:33 chromosome to the middle of the whether it's or what have you.

63:39 that's what we could call the origin replication. The abbreviation for that is

63:47 r I. Okay. That's where replication begins in the chromosome. So

63:58 . When it undergoes replication, cell in two. The want to make

64:04 that each cell gets a copy of DNA. So it kind of holds

64:07 in that middle spot copy kind of the segregation into the two cells.

64:16 mentioned. Plasmas can be in bacterial and archaea as well. Um There

64:23 be a couple there maybe 50 or depends on the cell. Our

64:29 Okay, average I'd say 5000. . Pretty much the average size contains

64:40 of the 10 rings. May be common. 3 to 5 I

64:45 But it's it's these uh so called chromosomal plasmas. Uh but these can

64:56 passage transfer between cells. Okay, how very often anybody resistance is passed

65:06 way. Okay, so he's gonna transferred. Okay. Uh just reside

65:12 their own. They're not tied to chromosomes in terms of replication and do

65:18 own thing, what we call call autonomous. They're kind of their own

65:22 in itself. Um but it can provide genes to the cell that it

65:29 have before by acquiring these. Um Okay, so the other

65:37 another feature prepares for the arrival zone there particularly always making proteins of some

65:45 like any cell basically is. And but the thing about is they aren't

65:56 to compartmentalizing the processes. It's transcription , right? Occurs basically together.

66:04 ? Because there's no nuclear memory and yourselves. Um transcription occurs in the

66:11 and then the transcripts exit the nucleus get translated into outside the separation of

66:19 process. Not so in precarious. . So we can have so here's

66:26 , you know, rival zones, terms of their size. Right?

66:32 ours are a little bit bigger but basic structure is the same. There's

66:36 subunits farms and small of course this where you put the synthesis occurs right

66:44 prepare again. There's no separation of process of transcription. So if he

66:49 to be transcribed, takes care of , producing a copy of the D

66:55 A R N a form messenger Right then, as soon as as

67:01 right here, basically I think I it written on here, there is

67:06 what's called Don't worry about this right . It's called an R.

67:10 S for rebels own binding site and will be a sequence right here.

67:19 what the looks for. It sees and goes bam translate. Okay,

67:24 as soon as that becomes its public also plop down there it goes and

67:30 begins translating their protein. Okay, once it moves down and then another

67:37 pops on and it goes and then one, then another one, Then

67:40 one. Okay, so pretty The whole strand is full of

67:45 each producing the same protein. Of down here, this guy's almost

67:50 So his strand is much longer than guy who just started. Right,

67:54 start finish. Right. And so you see the same thing over

67:59 all these little red blobs, black is the unit the blue are the

68:08 and the red are like gold. , so, um don't worry about

68:17 stuff. Just for showing the physical policy zones or poly wide zones.

68:26 right, so many ride the zones policy zones for short. Right?

68:31 own formation. So we call this unique precarious again, all all because

68:38 the there's no separation of these two all occurred yet. So because of

68:46 mechanism. What's the implication of What happens as a result of

68:52 Right? By having together 1 2 . Well, you can see by

69:00 red, these little strands here to proteins as as rival zones. Keep

69:05 down here and synthesizing. It's gonna a lot of protein very quickly.

69:10 of course you can also shut it down because very controlled as well.

69:16 it can make lots of protein very because of the fact that it's altogether

69:21 a big deal about that. Remember fast bacteria grew up growth means lots

69:28 protein because you're making new cells need have proteins do that. So this

69:34 one of the reasons why they can so fast. Right? Proteins very

69:40 . They have a small chromosome. ? So that that gets quickly

69:44 All factors why these things can these can grow so fast, reproduce.

69:50 ? But how can be so Uh lots of growth very quickly and

69:57 lots of protein production at the same . So all those hand in hand

70:02 this. Okay. Also, of because it is the components while they

70:10 the same in us. There are in terms of the structure and components

70:15 sequences making up. Right. That synthesis is also a target for

70:25 Target different parts of protein synthesis. tetrault cycling protein synthesis. Okay,

70:38 Any questions about this? So, get into more of the genetics.

70:44 is part of next year. But is uh uh aspect. And so

70:52 with structures in inclusions is kind of generic term for it can be food

71:01 type structures or granule is often called can be uh byproducts of metabolism.

71:10 can be uh structures for other But so inclusion is kind of a

71:15 name to encompass all that. And uh the first of these are kind

71:21 black called energy stores. Okay, these monochromatic Granules are basically polymers of

71:29 . So you take phosphates and stick together. Right? It will be

71:33 long in the cell. They staying methylene, blue and corona by terms

71:40 type that produces lots of these. you see the very bright blue

71:43 These are standing with how these are is to clip off one of these

71:51 added to ADP And you've got a . P. It's a quick it's

71:56 quick energy source for what it needs that Okay, so these can be

72:01 long. Lots of phosphates in parliament . So it can be again quick

72:06 source when needed. Um So starch glycogen. You're familiar with that because

72:14 restore glycogen in your muscles. Plant starch. So bacteria can do

72:22 Okay, again, it's an energy uh lipid inclusions also interview storage.

72:29 um PhD uh so yellow is kind the unit the moderated the polymer.

72:41 lots of this stuff to see the blobs are all ph b again,

72:47 you clip these off. Alright, can then metabolize the energy from

72:53 that kind of thing. Okay, of glucose. Palmer's clip off the

72:57 . You don't use them for energy sulfur Granules. So these are byproducts

73:06 Little Trophy metabolisms. Remember if you h. two s. These things

73:12 form elemental sulfur and they're inside the this yellow yellow clogs in the

73:21 And you see it here. all these are sulfur. Grand just

73:26 that happens. Okay. And then . Okay, so these are literally

73:33 come to think of as a Right? So to orient the cells

73:38 magnetic north or south depending on what you're in. Okay. So these

73:46 um will so if you see it , right? So again for the

73:51 hemisphere cells downward and toward north or and toward south depending on what side

73:59 the equator. Okay. So what's significance of that? What's really

74:04 Okay, this part right here. I wonder about this in the next

74:11 . Maybe next chapter. Anyway, and so remember this has to do

74:15 oxygen levels right? 02 levels. they don't like they either don't like

74:23 at all or just only like low of it. So by going downward

74:29 in the water column There's less 2 as you go deeper. So

74:36 them to kind of seek a level 02. That's optimal for them.

74:39 either very little or none or just little bit right? But by going

74:43 making them go downward because the magnetic they'll get to an optimal level.

74:48 it's not that that's that's what this about. So they're obviously aquatic aquatic

74:54 that use this property to kind of them to write on two levels.

75:01 okay. Um That anything. So all for today. And we'll finish

75:09 four and starting to metabolism all black quizzes the program it to show the

75:47 that they so um not not but they always automatically last night.

76:25 I gave a date in between in somebody has a legitimate reason for

76:29 So I used today to kind of up and that's why I have shows

76:34 automatically tomorrow on Wednesday. Yeah, points. All of them. And

76:59 in blackboard like half of the points what I'm actually getting. Yeah.

77:05 . So you were at each session you used it. Um Okay.

77:13 would say that. So it's it's points for each question, right or

77:21 . It's one point for I guess call it attendance. But to get

77:27 one point you have to answer the , Do you get that point?

77:34 if you have four questions and you , let's say you have two

77:37 you answer both questions right or You actually showed up for more than

77:44 . So you get the full five . Okay. Yeah. If you

77:47 there any way that I wouldn't get point because I was looking on blackboard

77:51 if only if only if you didn't the questions. Yeah. So I

77:58 say if you have an issue, ahead and for the support and go

78:02 person over to the library and check out for you. Thank you.

78:07 just wanted to let you know I get my email like results and

78:11 Um So yeah, but the thing that I had ordered it. So

78:17 just call it like right now and the confirmation code because I couldn't log

78:22 because I don't have the I. . Like the idea of the subscription

78:26 yeah yeah it's under the right Yeah they send it to the wrong

78:32 again I guess the subscription code because it just shows that I didn't buy

78:39 . All right questions like it was as I said last week I postponed

78:55 because there are people coming in. professor actually had a question over your

79:09 where you brought up the and for antibiotic what is it that the infection

79:23 ? Because the prime action is actually actually working. So it's basically inhibiting

79:29 well synthesis in the bacterium and killing killing actions what's producing the toxin.

79:36 the talks so that the patients getting because the release of the toxin is

79:41 the talks like that and that's just the cell. Right? Because now

79:46 patient has its good because the antibiotics and killing the cells but bad because

79:53 the gram negative and releasing those Right okay negative is releasing it.

79:59 because compared with the be that antibiotic binds up the end a toxin so

80:10 interact with your immune system cells so binds up and takes it away and

80:16 that's what you want to happen. that's why the patient gets better.

80:19 yeah I mean it's I mean the did get better because the infection was

80:26 . But they had to do the two which is get rid of the

80:30 of toxic because of the negative. having that just keep furthering itself.

80:39 then the mastering bio. You said on a two week free trial.

80:43 still have to purchase the access Yeah, that's what the guy told

80:47 that emailed me. He said he make people aware that because they sometimes

80:51 and they want to go and do assignment and then they realized I don't

80:56 access because the so that's what he's people that be aware of. We

81:04 be able to do the questions. correct. That's correct. Thank

81:10 Yes. We have like this for class and they're wondering if you could

81:16 your microphone. Thank you. I don't understand this thing. So so

81:29 do you interpret? I really didn't . I think it was talking about

81:32 envelope and how things can pass through membrane. That's correct. It's very

81:40 . So it's full of very full of these full of these waxy

81:47 molecules. So that's going to keep that's gonna slow things coming in

81:53 Plus the chemical nature of the milk coming in is gonna be slowed down

81:57 the thickness and the and the that's it's also the right but the amount

82:10 those in this big structure here is . It's really these things I

82:21 I have a lot of questions about . Is it okay if I just

82:26 in your office hours? Thank appreciate it.

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