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00:45 that's a custom. Okay uh Uh So uh let's see uh so

00:57 last week we've got blackboard quiz again week. Smart work Um assignment,

01:08 gonna finish up 13 today And uh into 14 on Thursday. So uh

01:18 see. So we also have um what are the events we get?

01:26 spring break? Um don't have the exam isn't until at the end of

01:32 week after spring break. So um on track to follow the schedule.

01:44 and so that's good. So then depending what you're doing during spring

01:49 of course, you have lots of between the end of the material and

01:53 the exam for two uh you really go over it a lot and

01:56 got questions. Certainly. Let me . Um So uh yeah um any

02:07 about anything before we get going Alright, so uh just uh I

02:15 put these things up doing over these last time, we'll continue through it

02:20 and uh next time uh through next . So uh let's see. So

02:27 um under one. So we're talking um metabolism. Okay we are talking

02:37 um really our life, although of we're focused on precarious in this

02:46 but obviously it's applies to all living including us, obviously that how one

02:53 energy from the things they eat to in basic terms, right? So

02:58 focused really on 13 hetero tropes. uh taking these large, organic,

03:04 complex organic molecules, breaking him We haven't gotten into yet. Natural

03:11 of what's going on here, We'll that today. But more kind of

03:16 . This is this is what's going . And so this term uh Delta

03:23 . Okay, think of that as the useful energy that um let me

03:32 can use to do their functions, it's allow anabolic reactions to proceed or

03:39 processes to proceed. Um remember that negative, there's positive and negative delta

03:48 . S. Right? So this of combining energy releasing processes with energy

03:54 to process that the actions that can uh concentration gradient as we saw.

04:01 see here right away the energy transfers transferring electrons to pumping protons out.

04:10 . And then again, combining the , energy raising process of photons going

04:17 . And that's the energy requirement process the pieces all fit together.

04:22 And so then um uh so respiration what we're looking at here. So

04:27 I didn't mention this term last time was sitting on the slide. So

04:33 you see on that on this in diagram, Okay, we can uh

04:41 basically three ways to produce a Okay, Oxidative foster relations you see

04:47 involving involving all these components. There's photo phosphor relation which actually does

04:54 not the identical components but the same components. Right? So in photo

04:59 phosphor relation, it's light that is driver for the system. But you

05:05 have info to foster relations electron transport Stuffed in the membrane. You have

05:11 80%. So all all of those are part of the photo phosphor relation

05:16 . Okay. Um and so and the other form of this uh the

05:22 way. Okay. This is what call substrate double phosphor relation.

05:30 Which is jumping the gun here because on a couple of signs ahead.

05:36 while we're here. Okay, abbreviate level. Very simple, very

05:43 Doesn't doesn't not as complicated as any this right here. All it is

05:48 substrate and subject can be any molecule medical pathway that's phosphor related.

05:55 So subject multiples phosphor related. Hands off to an A. T.

05:59 A T. P. That's Not even more complicated than that.

06:03 . And again, it's it's a a couple of three slides down from

06:07 . We'll see it again. But or on this picture anyway, I

06:10 mentioned it. So very simple. just have a phosphor coated substrate that's

06:14 of the reaction. And it hands frostbite filming to make a teepee and

06:19 it. And that happens a couple times in the process. We're about

06:22 go through black policies so try And so whereas substrate level of fossil

06:31 Theoretical yield was about four a Okay. The yield from oxidative is

06:38 34-36 80 p. So a huge . Alright. Almost 10 times

06:47 Eight times or nine times higher than you get the substrate of the blocks

06:52 . That's why restorations. That's a deal. It's the amount of energy

06:57 can ultimately get from that in the of a TPS. Um So and

07:03 it's the dilemma of a fermenting Okay. Because all they have to

07:09 on in fermentation is only this. , that's what the fermenter, how

07:16 get this energy is your subject of low levels of ADP compared to

07:21 Okay. But even though it's a , it can still grow pretty

07:28 You know, it has to have public departments as we'll talk about

07:32 Ok, but just kind of have throw that in my over here.

07:36 there's things to remember are the right? You have to feed this

07:41 of electrons, right? And so need to have a source. So

07:46 then that has a food source if want to. Okay, remember the

07:51 source itself is not interacting that this be a it could be a

07:57 Okay. It could be your electron . Right? But that banana's not

08:02 to interact directly with the electron transport and give electrons up. Okay,

08:06 better bring it down, right? then eventually broken down to individual molecules

08:13 that then those are what your sellers bananas high in carbs. So it'll

08:19 those down to individual carbohydrate units and other kind of things in there.

08:23 sure, I'm not sure. Always the banana. But um but

08:28 so the parts that it's gonna get off to electronic carriers, Right?

08:32 A D. H. D. . A D. H.

08:34 F. A D H I G . T. Right. Those are

08:38 molecules that interact with electron transport Okay. You see here an

08:43 Okay. And then uh then the keeping the flow going right now is

08:50 just to maintain the radiant you have sustain and keep it going into the

08:54 . Okay, So you you you your electron source upfront, That's feeding

09:00 . Okay? Then to keep flow , you have a terminal except er

09:04 so you organize your components in the to those that are very strong Electron

09:11 uppers. Okay, two very strong grabs right there were uppers to

09:18 Okay, In that oil. And um that keeps the total.

09:24 if you don't if you think I'm insane, just put a plastic bag

09:27 your head and tie it up and see how fast that that if you

09:32 that away, you're that well, got eight minutes, but essentially you'll

09:37 done in china. So, um that, you know, it all

09:41 to get keeping the float and feeding and then put me through the electron

09:46 chain. Okay? And then, know, sustaining that gradient, as

09:49 mentioned, right, these guys can down that proton motive force, right

09:54 attraction. Bring him in as well the concentration difference. So both those

09:58 combined. I wouldn't allow lots of to form a T. P.

10:04 . Okay so we're gonna direct this Here in a second kind of in

10:10 stage is kind of what goes This really is what we're focusing on

10:15 the rest of 13 is what's going here. Okay in this block.

10:26 . From electron source up to electron . What's going on in there.

10:31 what we're focused on. Okay so involves like palaces involves um fucking called

10:38 uh para away away the Krebs That's what's going on in that block

10:45 and then we get to the electron chain. Okay so the last thing

10:50 thing to mention before we go on fermentation. So fermentation does not involve

10:56 you see on that slide except for . Okay. And I'm not being

11:03 yet But it doesn't evolve electron transport or 80% based or anything. Okay

11:09 its own kind of thing. OK Any questions? Yeah. Oh sorry

11:20 me keep forgetting to move this All right there. You you always

11:24 that because I'll forget. All Um let's see. Okay so let's

11:29 at that correct, write the electron that are formed in the process of

11:41 down that food source. Those are interact but the source is that food

11:48 ? Okay but it's but it gets down and then certain reactions we capture

11:52 electrons and that's the role of electron that are before they actually physically interact

11:59 electron transport ship. Okay, so think of think of the food source

12:05 a as a mountain of coal and trying to carry another shovel that's throwing

12:10 into the into the fire burning. . Um Okay, here's the

12:17 Pretty basic question, but it's it seem silly, but I just I

12:23 to make a point here. Cata bolic processes such as cellular

12:27 released energy. Um based on the below, right in the box is

12:34 you can assume the energy released from could be used for the purpose of

12:42 a Tps. Um So is that assumption is correct or no.

12:51 assumption is uh false. Okay, um metabolism right releases energy. So

13:04 you assume that? But that's used 2018. Nothing worked. The screen

13:15 licking. Alright. That may mean the light was about to go

13:20 so hopefully not at this hour. hmm. Yeah. Okay.

13:31 So let's proceed B 21 survey says , good. Yes, the assumption

13:41 correct. Okay, um so because of the one of the things,

13:53 , let me go to the next and I'll see if it's still

13:56 We'll see how that goes. so here's another one then I'll make

14:00 point. Okay, so a positive G metabolic process. E anabel is

14:09 there's one that could be linked to teepee formation. True or false.

14:15 there's some some information that may you help you may find helpful to answer

14:20 question you know? So a positive G process is one that could be

14:26 to a teepee formation. Yes. . For do do do do you're

15:08 ? All right. 10. I knew I knew that would be

15:15 response. Okay. Which is precisely I didn't. Okay so this goes

15:21 to the what I keep trying to home that coupling energy releasing process with

15:28 public process. Okay so a um answered false? Why did you ask

15:38 boss? I thought that was you 14. So a positive delta

15:53 Process is what as you require. so what would that probably be linked

16:05 ? Yeah information and energy required. . Mhm. So that means that

16:14 this whatever this delta G positive processes energy. So you want to link

16:20 to something that will release energy like said. And that will be what

16:28 hydraulic sis. Okay so Annapolis um gonna be late to to negative delta

16:34 . Processes like like an A. . P. Hydra hydra Lexus.

16:40 is there something going out to tapping there? Something broke? Okay we'll

16:50 kind of yeah. Um Okay so to this again. Alright so um

17:00 a positive G process requires energy and we saw that with that um the

17:07 itty of delta G. To each . So we had that reaction of

17:12 plus uh phosphate to give glucose six was energy requirement was a positive delta

17:18 . But we added an A. . P. Hi causes to

17:21 And the net result was an overall delta G. Okay so the answer

17:27 this one is as written, it's . Okay. Because net positive energy

17:35 energy. Alright. A. Formation is energy requiring. Okay,

17:43 want a couple of injury requiring surgery ? Just gonna make it a bigger

17:47 delta G. Right, so you a couple anabel is um this process

17:54 say this okay. You might say makes sense. Yeah. So if

18:03 find it the energy from braking. . Right. Yeah exactly. That's

18:16 whole um there there are three phosphate that are all negatively charged together.

18:21 a lot of potential energy there. a lot of energy. So we

18:24 see that squiggly line with a P. High energy bonds.

18:28 Energy. Yeah. You're not in http they're using the you're gonna this

18:40 what you're gonna do. Okay, gonna take it you're gonna do

18:43 You're going to break that a teepee and then that energy is going to

18:49 coupled to making that reaction go you add the phosphate group to it for

18:53 for example. But that's that's what gonna do to make the process go

19:00 let's look at um let's look at this process here again. So um

19:07 again what's uh in the tabloids when breaking down larger more complex molecules example

19:14 we'll see it time and again. glucose to see CO. Two and

19:18 right? Like causes and cell That's accountability process. Um So uh

19:26 that process as you see their releases . Okay we release energy in the

19:32 . We're gonna form things like any these electronic carriers and so forth.

19:38 . And we can use that Right. And so I noticed how

19:44 have Annapolis. Um Right let me assets to proteins. Uh synthesizing

19:50 N. A. Alright that's that's anabolic process. Uh C. 02

19:56 make large organic molecules. That's Right. All those take energy.

20:01 . These are energy requiring processes. um so the A. T.

20:07 . Is the link Between the Right? Either um HTTP or ADP

20:13 . Okay so HTTP plus phosphate to a teepee requires energy. So this

20:23 requires energy. So the energy is come from metabolism. Okay we're gonna

20:26 that to metabolism and make a P. S. Okay well then

20:32 these A. T. T. . Um and then funnel them into

20:39 is um okay because when we hide them it releases energy. Right?

20:44 it's just coupling energy releasing process for energy requirements. Whether its metabolism linked

20:49 a VP formation or a tv hyperhidrosis released coupled to a positive delta

20:55 Process. Okay. Um Making them one makes the other go okay.

21:02 but whatever whether enables an orc metabolism have heat heat release. Okay.

21:09 uh whereas generally um bacteria can't do with heat. Of course we

21:16 We use it to to control our temp being endo. Therms.

21:21 But of course we also use uh have approximately 80 p as well.

21:26 we have we have people that we do stuff with them. Um Any

21:34 . Okay. So here's the question redox reactions. Alright. So and

21:46 you're answering this, the and so energy capture are the the transfer occupation

21:52 markets where we're gonna oxidized. Give electrons. Alright, cancel those electrons

21:58 characters. And then remember that, know, capture electrons capturing energy and

22:03 can do something with that as we've already. Right. Those electrons will

22:07 funneled down to like from transport chain do the whole Yeah. So maintain

22:13 proton gradient boost lots of HTTPS Okay. Uh but um so see

22:22 you can identify what's being optimized and being produced. Okay. And you

22:29 really in uh in biological reactions it's necessarily naked electrons being passed around but

22:36 hired you and it passed Alright, . Because the hydrogen represents one electronic

22:44 . Okay, so oftentimes transfer of Oops that one this 1 No mm

23:12 . Thank you. Yeah. Let's see. B B. Is

23:55 . Okay, so you get um you can follow the hydrogen is

24:04 You see here here. And that is one of those electrons have been

24:12 Captain. Right. So pie rate reduced. Right? It's it's um

24:19 up electrons here. Right. Two which equals two protons. Two

24:25 Okay. And in the process has black tape. Okay. A.

24:31 . H. Is the electron Yeah. Right. So it has

24:35 oxidized. This is deficient and A . Is deficient electronic given because the

24:40 has given them up my Canadian H pyrite reduced. Um the so a

24:47 of things. One oftentimes um people , okay, what's happened to

24:53 Okay, as lactose become oxidized or or? No, It's simply just

24:59 product of the reaction. Okay, only the only the oxidation reduction,

25:04 pirate reduced 88 oxidized. Okay, N A. E. Right.

25:10 the lactate are just the end Right? They haven't been oxidized

25:16 Okay, The N A D H been oxidized to anybody. Okay.

25:22 pilot has been reduced to lighting. ? Again, lactating any here's the

25:27 here. Okay. It could be energy becomes reduced, right to N

25:32 . D. H. We'll see happen. Right. But I just

25:37 you have to. So that's the here in D. Right. I

25:42 this oxides. That's not true. . It's just the end of this

25:47 lakhs reaction. Um Okay. And the Uh huh electrons, oxidation and

25:59 of course. Or how we're going capture energy. And we're going to

26:03 these kind of reactions occurring as we through the process of cell respiration.

26:09 so um in the in that when glucose is oxidized, Okay,

26:15 CO two oxygen is reduced to All right. And uh and in

26:22 process produced lots of energy that we yield us a lot of https.

26:29 . So, um so you're looking you know the methods or formulas of

26:35 things? Chemical formulas? So glucose the energy of course is in these

26:40 were going to oxidize glucose stepwise down pirate bait. Right? There is

26:47 major kind of fork in the road And then from there to eventually the

26:54 . Okay. And so in between gonna capture energy by electronic by oxidizing

27:01 to various intermediates. And then capture energy at the electron transport chain

27:10 burning up to two lots of a . Okay. Um and so that's

27:15 uh, blood from carriers are essential this. Okay, in this

27:19 So, you have a source. . But it's that source that although

27:23 source of electrons, it's going to broken down and it's in different stages

27:27 give up those electrons. That's why carriers are important in that In that

27:31 . Okay. And so uh and CO2. This is a very stable

27:38 right at glucose. Right. If had a you get a state model

27:45 you see corresponding angles and things and course these are all the electron clouds

27:50 into each other. So there's a of inherent instability in a large molecule

27:56 that. Okay. There's a lot potential energy there. Right. So

27:59 kind of break it down, we'll some of that energy ceo to very

28:04 . Okay, you can't break down . Right, so what you do

28:10 those that can do it use it a building block to make organic

28:14 That's the other trucks. Okay, that takes a tremendous amount of

28:20 Okay, Because you can see we're a bunch of chemical bonds. Now

28:26 making a big molecule, It's gonna a lot of energy and that energy

28:29 come from light. Okay, um you're a you can already come from

28:36 inorganic chemicals have a little Okay, um the contrast between the two.

28:43 , I don't think that That going glucose to CO2 and CO2 to glucose

28:50 just simply the reverse. They're not , fixation involves different anxieties proteins and

28:57 , but but certainly they're the opposite terms, you know, they're opposite

29:00 terms of energy. One releases energy requires energy to build it up.

29:06 . Um so just a brief word the N. A. D.

29:13 probably, oh, every Dhs is as well. A D. Is

29:18 more president. It's obviously also a type of electronic carrier among all living

29:25 . And the the part of the that is involved in the transfer is

29:34 here. Okay. And you always it written out in this kind of

29:39 . Okay, N A. D two hydrogen gives you N A

29:45 H plus H. Okay, so reason for that um has to do

29:51 the nature of the aromatic ring. , that you see here.

29:57 And um they can accommodate two electrons that ring. And there's this property

30:04 resonance. Um and so that was of travel around that ring. In

30:09 , we're gonna hold two of those it can't accommodate an extra hydrogen being

30:15 to the molecule. Okay, so why it's uh with the two hydrogen

30:21 two electrons are transferred. Only one bonded to the to the rain.

30:27 other one is as a proton. , so that's why you will see

30:31 written when it participates in these reactions always written like this in this

30:35 Nth plus H. Um Now the and so we're going to generate a

30:43 of these molecules and we're gonna generate lot of these forms. And these

30:47 the reduced forms during the process. , bye. Constance. And cell

30:52 at different steps. Okay. And are along with F. A.

30:57 . H. These are funneled two transport chain and that's what's gonna interact

31:03 and give up electrons. And so then will become oxidized at the electron

31:08 chain as it gives up those Okay. Um and so we mentioned

31:16 also as well earlier generation of Right. Oxidative population photo floss

31:21 substrate level of phosphor relation. And as mentioned before, such as

31:26 Fox relations. Pretty basic. There's a few steps where it happens

31:31 respiration like policies um and uh but doesn't yield a lot. It's not

31:37 not a teepee. There's there are of ADP there's only a couple of

31:42 where this happens. Okay. But is the only way in which a

31:47 can generate energy. Okay so oxidative relations relations transport chain, the scent

31:59 have maintaining a gradient all these Right? So obviously by comparison is

32:04 more complex than just your basic substrate Foster relations. Okay. But all

32:10 are the ways to make A P. S. Okay, so

32:17 . Alright so here is just a to illustrate um You know when you're

32:22 growing bacteria you can obviously use different of carbon sources um Different types of

32:29 terminal except ear's depending on the E coli is one that can actually

32:34 all three. You can ferment, can inspire Arabic lee or anaerobic.

32:39 depending on we're on itself and the , what things are available to it

32:45 eat. It can go these these different rounds. Okay. And so

32:50 of the the so this is kind just meant to show you know how

32:56 amounts can vary depending on how you it and what you grow on.

32:59 , from our biomass is basically a amount of living material you're getting.

33:04 for example, here um we start we inoculate with a few cells and

33:10 they begin to grow and grow and over time obviously. But then what

33:16 this in terms of carbon source and accepted. Right, so we see

33:21 the table okay the components there. again this this diagram of electron source

33:30 ? Eventually give me an electronic electron chain and then going to a terminal

33:33 er right. So you're gonna see diagram time and again. Right.

33:38 so in the table, electron source the carbon source, right? You

33:44 the left most column, the Alright, is basically what the turmoil

33:51 er is. Right. So an becomes reduced. Reductive becomes oxidized.

33:56 , sort of thinking that way. so so basically here we have um

34:02 look at an ethical. Okay Okay And it's the one that's represented

34:10 all three modes here. Mhm. here. Okay, so so you

34:19 it's broken down by an Arabic Arabic and fermentation. Okay. And so

34:27 ethanol using ethanol as a carbon source electron source. Okay, aerobically.

34:34 . Using oxygen. Right. Highest . Okay, 26 g premier.

34:40 , bio so that's 26 g of if you will per mole of

34:47 All right. Here is 24. that far off. Okay. So

34:53 tells you that. Okay, aerobics best right, oxygen is the strongest

34:59 agent. It's the strongest electron Okay, but nitrates not bad.

35:03 , so they will be able to off but not dramatic. Right,

35:06 , I don't know about respiration although doesn't use oxygen. They still pretty

35:11 good. Okay, but of course see a drop here with fermentation.

35:17 , 3 1/2. Because there's no acceptance there's no kind of transport

35:23 There's none of the there's no oxidative relation going on with fermentation strictly relation

35:30 a bit of energy. So, energy always has a consequence in terms

35:35 how much cells you get right, energy means can be more cells obviously

35:41 also want to have adequate amount of but that correlates. Okay, so

35:47 you look at glucose. Okay, see with auction gives the highest amount

35:53 biomass. Okay, so glucose, molecule. Okay, more carbon in

36:00 . More energy. New glucose molecule to ethanol ethanol is is C two

36:07 H 602. Okay, that's Okay. And then glucose is C

36:18 H 12 oh six. God, about that. Okay. Um so

36:26 interviews in glucose mosque here. And that's why you see a bigger yield

36:29 glucose over ethanol under equivalent conditions right versus here. Okay, so uh

36:40 more http more growth. Right? by the main one of the main

36:45 here is a fermentation, comparably speaking is worse. So Arab respiration.

36:51 respiration, fermentation in terms of Alright. Very gross. But anaerobic

36:59 aren't that far apart, right? depending on what your terminal accepted

37:05 Nitrates pretty good in comparison to Not sounds good, but not

37:12 So, um so just to show have any questions. So, Um

37:24 that kind of closes out one. right. And so we're gonna we're

37:29 gonna be talking about these concepts. it's not like we're going to leave

37:31 forever. But let's go into kind So this is how you want to

37:37 this stuff. Okay, So I before you have to memorize every single

37:42 , right? I don't even show every single reaction. But what you

37:46 want to know is stages. so that's what we're gonna And the

37:52 you see here, you should be with if somebody is just basic

37:56 but but you know, in terms David foster relation and what that

38:01 So, you know these terms and then kind of stages as you will

38:06 it now. So glucose um It's to keep kind of track of uh

38:14 carbon is only in the sense of going Being broken down for so six

38:19 , glucose. It's broken down actually it too. Three carbon pirate

38:26 Okay. And pirates. Really the in the road. So from there

38:29 can go different directions. Okay, on what it can do its capabilities

38:37 what's what's going on in the Okay, so in this step,

38:43 this is the box is basically not is right so in it goes slippers

38:47 , those pirates and then in the you have some energy capture in the

38:51 of a teepee. And th okay uh one or 2 directions right?

38:59 fermentation. OK and again if it's do that. Blacker than no oxygen

39:06 . Okay, that's how fermentation And the cells are capable of doing

39:12 . And so uh that generates these oxidation, small organic acids,

39:18 Okay. The if it can inspire or Arabic lee goes, houses are

39:26 to it and it's capable, it go that route. Okay and the

39:31 there is a this is basically um obligation slash formation. Okay, But

39:40 we're forming so we have two of that goes to two of these.

39:46 . To asI look away. And we released C. 02 in the

39:51 that's where we go from a three to carbon, we lose a

39:54 02 and then we form some in . D. H. Okay so

39:58 capture again in that stage then um cycle. Okay and that's the Krebs

40:09 and go through for each of away go around so we have two of

40:15 so twice around the cycle okay forming these energy molecules. Okay then these

40:23 into electron transport chain. Okay And whole proton pump https etcetera. So

40:32 it's more about what's we're at the is what's going on? What's coming

40:36 ? Energy captured. Okay so you of course electron carriers form here here

40:44 and here. Okay and there's different will turn in. Yeah well bring

40:52 the formation of lots of 80 as a result. Okay so um

40:58 we're gonna look at like paralysis and though I show you I'm gonna show

41:02 reactions that we don't need that the reactions of black policies. Okay you've

41:09 biochem later on you can memorize them that class. Okay but for here

41:14 kind of the overall stages what's going ? Okay um let's look at black

41:22 . Okay so and the Meyerhoff So we'll see you next slide.

41:28 alternate ways bacteria can can break down beyond and the Meyerhoff pathway. Um

41:36 this is the most common pathway we it as well of course. And

41:42 so one point here so even though process religious energy we're gonna capture energy

41:52 the form of in that game of teepee form eight and a th but

41:57 with a an overall negative delta So let me just show you picture

42:04 . So here is a rocks on of this hill, right? And

42:10 a negative delta G. Process goes . Okay, the downhill process,

42:17 a negative delta G. Okay, Federal lockup there, take that we're

42:22 down that releases energy. Um The that Rockport city has the hydro view

42:31 potential energy, Right? So potential is often about the state or position

42:36 matter. Right? So the the energy of Iraq is much higher sitting

42:43 top of the hill than it is we're sitting down here. Okay,

42:47 how do I know that? Because amount of potential energy, something has

42:53 translate that into how much change it cause. Okay, and so if

43:00 were standing here, okay, so that rock goes downhill, that's

43:06 create a heck of a lot of . Whereas not so the rocket is

43:13 and I'm standing here right level right. Of energy at that at

43:20 position. But the point is, though it's it's all these things negative

43:24 G. Lots of potential energy. , it still needs a kick in

43:28 pants to get going right? It's sitting on top of the hill,

43:32 have to get it growing down Okay, so I can come up

43:35 with a two x four and webbing between there maybe and get it going

43:39 spend a little bit of energy to the ball rolling. All right.

43:43 even though you're spending a little bit energy at the beginning, you're gonna

43:46 way more back. She's gonna net game in terms of Okay, I'm

43:53 saying all this just to explain what part of the cycle is about.

43:56 , this energy investment, right? even glucose and negative delta G.

44:04 glucose these ticket energized sort of Okay, so we have a little

44:10 of energy investment. A. P. A. T.

44:14 Right? So he falls for late post. Okay. Or intermediate in

44:19 pathway. Okay. And so phosphate here here that will energize glucose make

44:27 like the ball rolling down and get going. Alright. And so here

44:31 we break it apart into two molecules will become okay, we'll be

44:39 Um this intermediate called Glycerol three Okay. And that's what then becomes

44:47 okay, will be broken down further . Big. Um So really don't

44:52 so much about this around the philosopher I mentioned it only because that's

44:56 of what least on the road to bait. But certainly, you know

45:00 in this. Um And then we energy, we're gonna get energy

45:06 We're gonna get a surplus. So Tps form they're they're And then don't

45:11 any ideas also represents energy as Okay, in that game of 2

45:18 PS. And to any of the . So this way of making a

45:23 here right this step and that's the not seven and 10. Alright that's

45:29 substrate level phosphor relation. You have phosphor related substrate that gives it up

45:34 ADP to make a teepee. Um And this so far a fermenting

45:42 which we'll talk about shortly. This you see here is all enhanced to

45:48 energy. That's it. So for this is it it doesn't have you

45:54 the the electricity doesn't use electron transport all those components to make a

45:59 This is it relies mostly on Okay um So so the other thing

46:08 remember here it's anaerobic. Right? doesn't require the presence of oxygen.

46:14 um to make it go okay um all the oxygen may be present which

46:23 would you know Arabic responding organism, have black horses and cell respiration going

46:28 . Uh huh. The the active of options are not required to make

46:33 lot of policies work. Okay. So the other kind of alternative pathways

46:40 this are shown here. Okay so black cause that we just talked about

46:45 then we have what's called pathway or . D. For short. And

46:51 see this in generally uh bacteria that have the E. D. Pathway

47:00 also have the E. M. . Pathway. Okay E. Coli

47:05 one of those. Okay so um E. D. Pathway is kind

47:10 a an ancillary pathway that enables it use some kind of sugars that wouldn't

47:17 be able to use. And those of sugars are these things called sugar

47:23 . Alright carbohydrates that have these chrome groups on them. Okay. Rather

47:32 . So where do you find these of weird sugar acids? Okay.

47:37 turns out they're found really in the secretions of the gut. So it

47:45 sense then for ecological this pathway because found in the gut right and enables

47:49 to use these sugar assets when So you you actually produced them in

47:55 gut. Okay kinda helps keep the wall moist helps keep you know communicated

48:01 passing through etcetera those kind of But the conservative food source if the

48:06 has that pathway. Okay so um thing about E. D. Pathway

48:13 it produces energy for sure. Not as much as E. Right.

48:20 nonetheless like I said for most bacteria can have the but they do have

48:26 . Okay um the Pentothal correct. we have this as well. We

48:35 have the easy path but we have the mv pathway we have the pintos

48:41 as we made it back to But that equates mostly too. Although

48:46 can't produce some energy you see here role is in producing things like certain

48:52 acids aromatic amino acids nuclear times he's things from bio synthesis. Right?

48:57 conform these different lengths of sugars. , Through this key intermediate here.

49:06 phosphate. Okay, so these are of building blocks to make these different

49:12 of modules. And so when you see pencils transformation, it rolls typically

49:18 sentences. Right, produce these building to make stuff. Okay. Although

49:23 in times of stress or things like , you can't refuse that as an

49:27 source. But its primary role is synthesis. Okay. Um Okay.

49:35 uh any questions? Yeah. What ? And the causes american investment?

49:50 , wait back on this slide It doesn't go with energy.

50:00 It's what does it go to the bottom left? Oh yeah. Well

50:09 it's it's it's um it gets quickly into this red line three phosphate.

50:15 , so you actually have two of up here and one is formed

50:20 One comes from that other rackets, you feel the enzyme that can paralyze

50:25 . But yeah, when you break , 16 different state in two.

50:29 of those becomes it goes around and other one doesn't but very quickly is

50:35 to it. Yeah, it's I remember the enzyme but it's it's a

50:38 reaction that occurs. So Yeah. . Um many of them.

50:45 Alright, so let's look at So is going to be the segway into

50:54 . I'm going to their detour home way. Yeah. So um All

50:59 , so like so dr black Right. So terrific acid is the

51:04 intermediate there and then we can go of two ways respiration which will uh

51:11 talked about this already kind of an context but we'll break it down

51:16 We're first gonna talk about fermentation. And so the thing to remember about

51:22 is its energy capture relies solely on causes. Okay. And so this

51:32 critical then to keep this part of going because that's what produces the energy

51:37 from from answer. Okay, now are some exceptions to this but I'm

51:41 gonna kind of keep it uh for most of them do. But the

51:46 of course is there is no oxygen . It's an anaerobic process. Um

51:51 so the thing is uh so having saw black Hollis is right, how

51:58 is the fermenter? Keep black Hollis going to keep maintaining Okay, well

52:04 of course you have to have a source and so the fermenters can use

52:09 kinds of things as as a sugar . Right? In lab the today

52:15 a matter of fact one last you of course glucose we saw sucrose and

52:19 saw lactose and sugar sources for Right? And of course there's 100

52:23 things they can use as well. carbohydrate sources and so have a supply

52:29 sugar. Okay then of course have supply of ADP and phosphate.

52:36 That's not generally not a problem in . Okay. And then have keep

52:44 . Alright. Have N. D. Right there. Those are

52:48 three participants in this process, Sugar, ADP and phosphate and

52:54 D. Okay. So you got keep those supply to keep the process

52:58 . Alright. So we have lots sugar ADP and phosphate and A.

53:03 . And then you'll make a TPS you'll and you'll keep the process

53:09 So you have to regenerate right? gonna keep forming an A.

53:11 H. Alright, but you gotta a way to take this back to

53:17 . A. D. Okay, you're fermenting, right? They're not

53:22 . A. T. H. the fermenter while it's fermenting is not

53:25 to electron transport chain and become Right? Because for it just doing

53:30 . So this will accumulate. All . That will accumulate unless you do

53:38 actually stopped the process. So you to keep oxidizing in the H.

53:43 they can go back up here and continue sustained fermentation because that's how it

53:48 its energy. Okay, so you'll that um pirate bait gets converted to

53:57 like lactic acid, ethanol, lots other stuff. Right. Different types

54:02 organic acids and alcohols. Okay. those reactions um all of those reactions

54:11 some point lead to the formation of . A. D. Right?

54:15 can go back up until that And keep producing guarantees. Okay,

54:19 that's really what a lot of these fermentation reactions are beyond pirates are for

54:25 purpose. Two take the N. . T. H. And then

54:30 Andy go back up so it can sustained like houses for 80 P.

54:35 . Because that's the only way you get energy upper mantle. Okay.

54:39 let's look at um um that's the there. That's what the fermenter

54:45 Okay. Um So here is lactic fermentation, Right? And so um

54:55 our glucose or sugar source. I'm gonna form prior bait. See

55:01 . And then part of it forms acid. Okay, so in this

55:08 , all right. What is being ? Right, You have three

55:16 A B A N A. H. B. Para B C

55:21 . Which one is being oxidized in process? Okay. Yeah, approximation

55:41 that electrical. Thank you. It's yeah, he answered. What is

56:02 ? A. B. And A. N. A.

56:04 H. B. C lactate, , positive. Mhm, mm

56:19 Okay, it's actually a different version the question we had before That multiple

56:27 push other other one. All mm hmm. Okay. So uh

56:39 is correct. Is oxidized. so any th uh oxidized any de

56:48 bait is reduced to lactate? The is reduced. You can just look

56:55 here. So but the point that reaction is we keep regenerating this,

57:02 ? That can go back and look causes. Alright, so keep that

57:06 . And alcohol fermentation which of course yeast can do that. Okay.

57:12 can bacteria pirate bait to a hotel hide. Okay. And we have

57:18 D. Card box elation there. . And again from black holes as

57:24 get an A. D. Right to form ethanol. Okay,

57:30 without doing a clicker question on What's reduced shout out if you know

57:36 ? Mhm. So fire bait asked hide or any th what's reduced So

57:53 hmm. So what's participating in the reaction here? Alright. It's stuff

58:00 over here. So what's becoming B Yeah. Right. So here

58:14 here. Okay. So as the the ethanol. Okay, so that's

58:22 my favorite fermentation. Okay. For obvious reasons I hope. Okay so

58:30 so again the point is regenerate Alright. Regenerate. That keeps the

58:37 houses train running. Alright. That's the computer forms. Right? And

58:41 a fermenter has a number of obstacles to achieve a a high biomass in

58:49 . Okay, they get um uh metabolism that it doesn't produce a lot

58:57 energy because it's not respiration. could be a substrate level phosphor relation

59:03 to it's um Yeah. Okay. had products or inhibitory. So

59:15 ethanol for or um like the gas ph changes alcohols victorious and sort of

59:24 . So they face that eventually in of unless unless the material is dissipating

59:29 use it or it goes elsewhere doesn't but you know in a manufacturing process

59:36 you're doing these things back then you can't hit them. Okay. There's

59:42 to get around it. There's engineering to get around it. You can

59:47 Mhm. Uh have yeast that are to high levels of ethanol particularly.

59:54 ? So you can have wine production um Weinstein today's typically that used to

60:00 able to 99 or 10% alcohol. they can reach up to 18% alcohol

60:06 that's because of development of yeast strains are able to tolerate these higher levels

60:11 alcohol. Okay. Um Any questions . In the blackness and part is

60:24 because they're missing bacteria that ferment black do ourselves? Uh Yeah it's a

60:33 in an hour cells. Yeah that happens and that happens to be a

60:40 also has to have not just you have some whatever. How about certain

60:47 of people also can be intolerant, the intolerance. Like certain certain asian

60:52 have that intolerance I think as It just depends, it varies but

60:56 um but yeah it's become a deficiency ourselves to do that. Yeah.

61:03 The but I think you can't alleviate with probiotics I think um the

61:14 C. A. Cycle. So you don't need to know every step

61:20 the pc A cycle. What's wrong what's the overall process going on

61:24 Okay so again back to the fork the road thing. So it was

61:30 conditions with a back here is capable responses and the conditions and nutrients are

61:38 for it to do that, then will go this route which begins with

61:45 down pira bait to um acetyl coa . So when you look at the

61:50 process in terms of energy. Free energy. So initially glucose needed

61:58 have some energy put into it, the ball rolling and then we captured

62:03 energy along the way. Okay. then so think of staying with that

62:09 analogy right here is glucose is our let's say on top of the

62:17 Okay, put a little bit of in right? Got the ball

62:20 Right? Then we captured that as T. P. And A

62:26 H. Right now we're down here . Right? So now we have

62:34 we have to pump pirata right to to make it more reactive, so

62:38 speak. Right? We need to bring it back up. Okay,

62:42 what this is about. This is to kuwait. Okay? Or like

62:48 . Okay, A Okay, it it's a Tps are often wrong with

62:57 . That uh the show. So have three phosphates in a teepee.

63:01 ? That terminal one has that squiggly on it. Right? So high

63:06 phosphate bond. Right? That gets right? In the process of hydraulic

63:11 releasing energy. Right? So as look away has the same thing,

63:16 also has that high energy bond, what I wanted. So when we

63:23 at the way it too has had high energy bond so you can attach

63:30 to a molecule and kind of pumps up so to speak. Okay.

63:34 so that's what we that's the purpose doing that the pirate made just kind

63:38 and inject some energy into it. now we can we can get it

63:43 the T. C. A. and then capture more energy right

63:46 Get a surplus back. Right? so along the way in this pirate

63:53 slash cynical information we're going to capture . Okay. In the form of

64:00 an A. D. H. ? We're gonna lose seO to a

64:04 to group and now we have two and silica way that goes into the

64:08 cycle. Yeah. And so we two of those. So you can

64:15 at it two ways, right? you can have um per or per

64:24 . So goes around the cycle. formed three and a th okay.

64:32 23 one F A. T. . Two. Those are electron carriers

64:38 we have one step That's one of substrate level of phosphor relations. Okay

64:44 ADP directly. So 311. Now we can also look at it

64:49 terms of per glucose right? Um goes to two Acetyl Coa ways

64:57 So we double up. Right so glucose is twice because we formed two

65:03 these and he travels around watch. . So basically doubling our energy apple

65:09 glucose. Okay. And so um so at this point then glucose completely

65:18 the sio two is all forms. , you see here is the remaining

65:22 to here and here. Okay, now we're at SEO to walk right

65:27 the oxidants. It's so uh you , along the way we've accumulated uh

65:34 of these N. A. H. Is actually 10 A

65:38 H two, F A T H and uh four https total.

65:45 our next game. Right. And the the the tch cycle is one

65:53 those what we call central points in . Okay. You ever looked at

65:59 metabolic chart? You'll see arrows going eligwe pathways every which way. But

66:05 you'll see a bunch of arrows going and going away from the T.

66:09 . A cycle. It's it's a where proteins when they're used as energy

66:15 , they eventually funneled down to the cycle. Fat metabolism, funnels in

66:21 T. C. A cycle, number of these molecules. And tch

66:26 itself are building blocks to make other like amino acids and nucleotides and stuff

66:32 that. Right. So it's uh for both processes. Both kept embolism

66:37 and vandalism are linked by TC a in many cases. Okay. Um

66:44 but the work for what we're talking . Right? It's it's of course

66:50 big energy producer in terms of these characters being formed. Okay. And

66:56 um and so we look at the process. Okay. And again,

67:03 we get into 14 uh we'll focus little more on some of the specifics

67:08 . But for now it's just kind an overview. So in respiration,

67:12 complete oxidation of glucose involves the black is part of the beginning and then

67:17 respiration respiration part which involves the accumulation electron carriers. Okay. That will

67:26 follow down to electron transport chain and produce lots of 80 p.

67:33 so that again, all of this as mentioned before is oxidative frosty

67:37 All this that you see occurring Okay. And um again, the

67:45 between what you get through oxidative foster . Words of energy versus substrate

67:52 false relation is huge. Right? that um that is of course embarked

68:00 to maintain growth and functions etcetera. know, your most uh your most

68:07 using tissue in the body is what , read teacher. They can only

68:14 glucose. Right? So um it's Yeah, thanks. Will you put

68:20 socks and compete to keep that brain go. Alright, so um

68:27 Any questions, what I wanna do this I'm gonna this is relatively

68:32 I'm gonna I'm gonna go to these of clipper questions. So aromatic metabolism

68:37 can uh we can wrap that up quick next time. But let's look

68:40 a couple of questions. Okay, here's uh you know, kind of

68:47 something a good exercise to do to how well, you know, the

68:51 and things. Right. So, you identify where the lakota way might

68:59 ? Okay. Mhm, mm Okay, Sharing 100 se de um

70:07 is correct. There are two Yeah, you got you got full

70:23 whether you got it right or Don't worry about it. Yeah,

70:28 in a test. Of course, see it. So you answered that

70:37 ? That right? All right. right. Okay. Let's look at

70:43 not that one, but this one I got purpose for this one.

70:58 , mm shame drugs. So, the true statement, I think I

71:31 what everybody's gonna pick. Maybe Let's see. Yeah, time is

72:08 . I'm not sure. Just pick . Mhm. Alright, let's

72:38 Okay, um that thing won't So try so see. Okay,

72:51 The correct answer is done. It's the source, the food is the

72:59 . I said that 10 times. . And I thought presentation seems anaerobic

73:07 . No, no, no, respiration is a very specific thing.

73:12 , so you got to go do own fermentation lab. Alright, so

73:18 go do that. Alright. Sucrose and glucose presentations. All right,

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